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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12842576_12851463_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12842576 - 12851463

Intron Length:

8888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

AATTCAGGAAGA

Flanking Amino Acid:

ERFDGLSLIYWTLMGPYGMD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.1

37.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

77.1

0.61

0.7

69.1

31.5

Minor 5ss

42.2

-0.9

2.9

56.1

42.2

Minor BPS

41.6

-0.6

2.4

57.31

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017203

12813111 - 12852338

39228