Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_1286487_1290270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1286487 - 1290270

Intron Length:

3784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTCTTCTGCATT

Flanking Amino Acid:

KPSLLQRSNTESAVVLEEGS

Intron Amino Acid Position:

1268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

69.1

0.43

40.8

Minor 5ss

26.7

-2.7

3.3

37.5

47.2

Minor BPS

53.5

0.19

1.9

75.82

41.6

Associated Gene:

Gene:

TSC2

Ensembl Gene ID:

ENSAPLG00000007194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023658

1275841 - 1314143

38303

ENSAPLT00000023056

1275841 - 1311261

35421