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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12870541_12870972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12870541 - 12870972

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CACGGTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GTCACACGAAGC

Flanking Amino Acid:

QNHPGKNAIEAHIEAVHADW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

64.9

0.34

56.1

43.3

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

38.1

-0.9

2.1

47.09

41.3

Associated Gene:

Gene:

PPL

Ensembl Gene ID:

ENSAPLG00000004977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005165

12869678 - 12883516

13839