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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12875554_12875634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12875554 - 12875634

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAA

U12 Branch Point Sequence:

TGTGCTTCAACA

Flanking Amino Acid:

VVQLLSAAQEKVEVATHLEK

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

60.4

0.26

1.3

65.6

41.4

Major PPT

73.2

0.52

66.8

39.6

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

62.2

0.38

1.7

72.25

39.9

Associated Gene:

Gene:

PPL

Ensembl Gene ID:

ENSAPLG00000004977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005165

12869678 - 12883516

13839