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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12875774_12876645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12875774 - 12876645

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGAGAAT

U12 Branch Point Sequence:

GCTTTTTCCACA

Flanking Amino Acid:

VIDRKKEELLAMGSELQSKR

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

45.6

-0.2

1.4

49.8

42.2

Major PPT

81.1

0.7

0.8

75.9

32.8

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

47.3

-0.2

1.9

59.24

41.1

Associated Gene:

Gene:

PPL

Ensembl Gene ID:

ENSAPLG00000004977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005165

12869678 - 12883516

13839