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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12877956_12878405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12877956 - 12878405

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GTAATCTCACCT

Flanking Amino Acid:

TAQQYQQAVKDYELEAEKLR

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

77.8

0.63

0.7

72.6

25.6

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

48.1

-0

1.8

66.54

43.6

Associated Gene:

Gene:

PPL

Ensembl Gene ID:

ENSAPLG00000004977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005165

12869678 - 12883516

13839