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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12890039_12891107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12890039 - 12891107

Intron Length:

1069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CCTGACTGACCT

Flanking Amino Acid:

SSTASSTSVPKGTSGAVLLT

Intron Amino Acid Position:

1005

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

69.2

43.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

84.2

0.77

0.8

36.6

Minor 5ss

39.2

-1.2

2.9

49.5

46.5

Minor BPS

44.9

-0.3

61.18

48.2

Associated Gene:

Gene:

UBN1

Ensembl Gene ID:

ENSAPLG00000005248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048239

12886799 - 12908986

22188

ENSAPLT00000033159

12886799 - 12908986

22188

ENSAPLT00000024199

12886799 - 12908986

22188

ENSAPLT00000005467

12886799 - 12908986

22188