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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12893931_12896823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12893931 - 12896823

Intron Length:

2893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCACTTCTCATT

Flanking Amino Acid:

PLWPKGWMQARTLFKESRRV

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

78.1

0.63

0.7

76.8

25.2

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

42.7

-0.5

1.9

57.83

39.7

Associated Gene:

Gene:

UBN1

Ensembl Gene ID:

ENSAPLG00000005248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005467

12886799 - 12908986

22188

ENSAPLT00000048239

12886799 - 12908986

22188