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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1290487_1290924_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1290487 - 1290924

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTTA

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTTCACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TCTTCCCTAATT

Flanking Amino Acid:

WAEILVRRPTGNTSWLMSLE

Intron Amino Acid Position:

1196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

76.7

34.9

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

83.9

0.76

0.8

78.6

34.6

Minor 5ss

68.9

0.64

1.8

75.8

40.1

Minor BPS

0.83

1.6

88.6

36.6

Associated Gene:

Gene:

TSC2

Ensembl Gene ID:

ENSAPLG00000007194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023056

1275841 - 1311261

35421

ENSAPLT00000020598

1275841 - 1311261

35421

ENSAPLT00000007609

1275841 - 1311261

35421

ENSAPLT00000029382

1273205 - 1311261

38057

ENSAPLT00000023658

1275841 - 1314143

38303