Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_1292849_1297290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1292849 - 1297290

Intron Length:

4442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAT

5'SS Class:

strong_major

3'SS Sequence:

CGTTCTCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TGATCTGTCAGT

Flanking Amino Acid:

RSTSLNERPKSRIQTSITSS

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

80.3

34.3

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

77.9

0.63

0.8

69.7

36.7

Minor 5ss

35.2

-1.7

3.1

49.5

46.7

Minor BPS

-0.4

2.5

64.81

45.8

Associated Gene:

Gene:

TSC2

Ensembl Gene ID:

ENSAPLG00000007194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023658

1275841 - 1314143

38303

ENSAPLT00000020598

1275841 - 1311261

35421