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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1297709_1298027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1297709 - 1298027

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

GCAGCATTAAAC

Flanking Amino Acid:

AISLPYTNPSKFNQYIVCLA

Intron Amino Acid Position:

869

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

70.2

0.5

71.6

30.1

Major PPT

79.2

0.66

0.9

77.4

36.9

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

48.2

-0.1

1.8

54.66

42.6

Associated Gene:

Gene:

TSC2

Ensembl Gene ID:

ENSAPLG00000007194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023056

1275841 - 1311261

35421

ENSAPLT00000020598

1275841 - 1311261

35421

ENSAPLT00000029382

1273205 - 1311261

38057

ENSAPLT00000007609

1275841 - 1311261

35421

ENSAPLT00000026815

1287238 - 1311261

24024

ENSAPLT00000023658

1275841 - 1314143

38303