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Intron Name: Anas_platyrhynchos_platyrhynchos_15_12987294_12987425_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12987294 - 12987425

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGCCTTTC

5'SS Class:

weak_major

3'SS Sequence:

CATGGTGGAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

GCTTCACTGACT

Flanking Amino Acid:

TSPPSVYHQVTVGIRSWTPT

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.2

54.1

40.3

Major BPS

61.3

0.28

52.7

34.2

Major PPT

46.6

-0.2

1.2

40.9

41.9

Minor 5ss

45.1

-0.5

56.7

42.3

Minor BPS

52.6

0.16

74.36

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018359

12986035 - 12987496

1462