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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13054857_13056068_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13054857 - 13056068

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCAGTTCT

5'SS Class:

major

3'SS Sequence:

GTTGTGAAATCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TTTCCCTAAACT

Flanking Amino Acid:

RHDNRRRSRSKSKPPKRDEK

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

75.2

35.7

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

59.6

0.22

1.1

56.9

46.7

Minor 5ss

-1.1

2.8

51.9

38.5

Minor BPS

77.1

0.93

1.6

93.68

34.1

Associated Gene:

Gene:

RNPS1

Ensembl Gene ID:

ENSAPLG00000006231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018132

13054110 - 13059805

5696

ENSAPLT00000006452

13052615 - 13058882

6268