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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13056948_13057429_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13056948 - 13057429

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGT|GCATGAAAT

5'SS Class:

weak_major

3'SS Sequence:

CCATGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TGACACCTACCT

Flanking Amino Acid:

AVISCPSIWPVAFSASSGFS

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.5

0.08

1.5

58.5

45.8

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

72.4

0.5

68.4

41.9

Minor 5ss

32.9

-2

4.1

49.3

46.7

Minor BPS

45.2

-0.2

2.1

65.52

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041568

13056908 - 13059056

2149