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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13057600_13058773_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13057600 - 13058773

Intron Length:

1174

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGGGAAG

5'SS Class:

major

3'SS Sequence:

TTACACTGAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TCTTGTTACACT

Flanking Amino Acid:

GDLRLGDRDLEIQIVTSHLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

61.9

42.9

Major BPS

71.4

0.53

1.2

63.4

Major PPT

51.9

0.04

1.2

53.8

Minor 5ss

-3.5

3.9

26.3

38.4

Minor BPS

-0.2

2.4

70.57

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025549

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041568

13056908 - 13059056

2149