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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1306346_1306684_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1306346 - 1306684

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAG

5'SS Class:

strong_major

3'SS Sequence:

CATCTGTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

CATCTGTTCACA

Flanking Amino Acid:

IYNMCRIMEDRAYMADAALL

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

74.4

0.55

0.9

67.7

37.4

Minor 5ss

-2.2

3.2

38.7

46.6

Minor BPS

44.2

-0.4

2.4

57.05

42.5

Associated Gene:

Gene:

TSC2

Ensembl Gene ID:

ENSAPLG00000007194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023056

1275841 - 1311261

35421

ENSAPLT00000020598

1275841 - 1311261

35421

ENSAPLT00000029382

1273205 - 1311261

38057

ENSAPLT00000007609

1275841 - 1311261

35421

ENSAPLT00000026815

1287238 - 1311261

24024

ENSAPLT00000023658

1275841 - 1314143

38303