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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13077476_13078616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13077476 - 13078616

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

GCACCTGTAACA

Flanking Amino Acid:

HYLRVEEFHVAYRYLEEMRK

Intron Amino Acid Position:

1398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

86.2

0.81

0.7

85.6

29.2

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

48.6

-0.1

58.17

41.4

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006780

13077272 - 13150303

73032

ENSAPLT00000011743

13077272 - 13150303

73032