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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13080941_13081401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13080941 - 13081401

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

TGCTTTTGAACA

Flanking Amino Acid:

AFNNAIRLCKENNLDDQLMN

Intron Amino Acid Position:

1051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

34.5

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

71.9

0.49

68.9

40.8

Minor 5ss

34.6

-1.7

3.5

45.7

49.5

Minor BPS

61.8

0.37

1.4

68.24

38.3

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006780

13077272 - 13150303

73032

ENSAPLT00000011743

13077272 - 13150303

73032