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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13081546_13081636_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13081546 - 13081636

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

AGCTATATGATT

Flanking Amino Acid:

VHCFQGDIQKAAEIANETGN

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

75.8

0.64

65.8

Major PPT

0.85

0.7

85.4

28.4

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

45.4

-0.2

1.7

59.57

37.8

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006780

13077272 - 13150303

73032

ENSAPLT00000011743

13077272 - 13150303

73032