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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13082238_13083218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13082238 - 13083218

Intron Length:

981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TTTTTCTCTACA

Flanking Amino Acid:

AVGEHSLALTHYEKSDTHRF

Intron Amino Acid Position:

926

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

61.2

43.9

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

93.1

0.97

0.6

88.4

21.4

Minor 5ss

41.9

-0.9

2.9

57.8

40.7

Minor BPS

0.4

1.9

79.36

36.5

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006780

13077272 - 13150303

73032

ENSAPLT00000011743

13077272 - 13150303

73032