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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13083410_13086155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13083410 - 13086155

Intron Length:

2746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAC

U12 Branch Point Sequence:

CTCTTCTTTAAG

Flanking Amino Acid:

AVLAIQLGMLEDAEQLYKAC

Intron Amino Acid Position:

863

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

42.9

Major BPS

56.9

0.17

1.4

67.6

36.5

Major PPT

71.9

0.49

75.2

33.6

Minor 5ss

40.7

-1

3.1

43.2

Minor BPS

49.4

-0.1

1.9

55.62

45.6

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011743

13077272 - 13150303

73032

ENSAPLT00000006780

13077272 - 13150303

73032