Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_1311277_1314110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1311277 - 1314110

Intron Length:

2834

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCAGCTACA

5'SS Class:

major

3'SS Sequence:

GATCTGTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CCCCCCCTAACA

Flanking Amino Acid:

FLSTASEPFLGLGAAMAKPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.3

39.2

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

63.7

0.31

1.1

57.3

42.9

Minor 5ss

-2.3

3.9

39.8

40.9

Minor BPS

54.1

0.12

1.8

61.14

44.6

Associated Gene:

Gene:

TSC2

Ensembl Gene ID:

ENSAPLG00000007194

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023658

1275841 - 1314143

38303