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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1311798_1312110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1311798 - 1312110

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGA

5'SS Class:

major

3'SS Sequence:

CTGCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCGGGCTCACGC

Flanking Amino Acid:

RLGRAGTGAAASRAPSAGSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.2

42.1

Major BPS

52.1

0.05

1.3

41.8

Major PPT

71.4

0.48

0.8

65.4

30.4

Minor 5ss

27.5

-2.6

3.6

38.1

46.8

Minor BPS

-1.3

2.1

32.89

42.4

Associated Gene:

Gene:

NTHL1

Ensembl Gene ID:

ENSAPLG00000008412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008743

1311740 - 1317241

5502