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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13123353_13124464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13123353 - 13124464

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

TCTCTGTGGATT

Flanking Amino Acid:

EVPHYYFAKKLFFRRGFAYK

Intron Amino Acid Position:

728

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

65.1

0.34

0.9

63.9

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

44.6

-0.3

2.1

64.22

40.8

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006780

13077272 - 13150303

73032