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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13124597_13124823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13124597 - 13124823

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAGGGTCT

5'SS Class:

major

3'SS Sequence:

CTTCCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

AATTCTTTACTT

Flanking Amino Acid:

NQNKNQTESTMDVWIMSFFS

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.6

0.27

1.1

58.1

41.8

Major BPS

0.6

65.6

41.1

Major PPT

87.7

0.85

0.7

80.1

31.9

Minor 5ss

40.2

-1.1

3.6

61.5

44.1

Minor BPS

66.3

0.59

1.5

79.18

37.3

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006780

13077272 - 13150303

73032

ENSAPLT00000011743

13077272 - 13150303

73032