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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13128547_13129980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13128547 - 13129980

Intron Length:

1434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAATT

5'SS Class:

major

3'SS Sequence:

TTCCTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

ACAACTTAAACT

Flanking Amino Acid:

SHFKIFDLSRREAKVHCNSK

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

79.1

34.1

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

83.7

0.76

0.7

79.4

26.2

Minor 5ss

45.6

-0.5

2.9

66.8

44.1

Minor BPS

54.1

0.21

1.7

67.64

43.2

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011743

13077272 - 13150303

73032

ENSAPLT00000006780

13077272 - 13150303

73032