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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13134644_13135438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13134644 - 13135438

Intron Length:

795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGAATGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AATATCTAAAAT

Flanking Amino Acid:

INCVSYCSAKGLLAAGTNKG

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

60.8

0.24

1.1

55.2

43.7

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

51.3

0.12

1.8

69.48

40.9

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011743

13077272 - 13150303

73032

ENSAPLT00000006780

13077272 - 13150303

73032