Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_13135546_13136732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13135546 - 13136732

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GCATTGTTAACT

Flanking Amino Acid:

IVTAIGETVVRFWDLDRGEN

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

71.1

0.48

69.4

41.7

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

57.1

0.3

2.1

72.9

43.9

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011743

13077272 - 13150303

73032

ENSAPLT00000006780

13077272 - 13150303

73032