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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13138743_13141343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13138743 - 13141343

Intron Length:

2601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

ATATATACTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTGTTTATATAT

Flanking Amino Acid:

GLSFFVTLMDGSVHCVNEKG

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

0.38

59.9

40.6

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

47.3

-0.1

1.9

69.33

41.8

Associated Gene:

Gene:

IFT140

Ensembl Gene ID:

ENSAPLG00000011283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011743

13077272 - 13150303

73032

ENSAPLT00000006780

13077272 - 13150303

73032