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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1314744_1316339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1314744 - 1316339

Intron Length:

1596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

CCCACCTAAACT

Flanking Amino Acid:

NIAWNSVSGIAVDTHVHRIT

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

63.9

0.35

63.9

30.3

Major PPT

76.2

0.59

0.7

69.1

31.4

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

55.8

0.26

1.8

67.89

48.7

Associated Gene:

Gene:

NTHL1

Ensembl Gene ID:

ENSAPLG00000008412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008743

1311740 - 1317241

5502