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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13172379_13175691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13172379 - 13175691

Intron Length:

3313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCAATATATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTCTCTTTCAAT

Flanking Amino Acid:

AAKLNELIQAGATTVRYKGR

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

76.9

0.67

1.2

31.9

Major PPT

68.2

0.41

59.1

45.2

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

61.2

0.43

1.9

80.63

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011810

13156984 - 13186744

29761

ENSAPLT00000034494

13155304 - 13186744

31441

ENSAPLT00000020902

13156984 - 13186739

29756