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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13177795_13178806_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

13177795 - 13178806

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACAGCTTTTTTAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TAGTCTTTAACA

Flanking Amino Acid:

QKWALHEVRIRKTLEERQLQ

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.5

-0

1.4

44.6

Major BPS

74.7

0.61

65.9

40.9

Major PPT

69.4

0.44

0.9

Minor 5ss

95.1

1.52

0.8

90.6

Minor BPS

80.2

0.94

1.1

80.41

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034494

13155304 - 13186744

31441

ENSAPLT00000020902

13156984 - 13186739

29756

ENSAPLT00000011810

13156984 - 13186744

29761