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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13179564_13179641_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13179564 - 13179641

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCGGGAGGA

5'SS Class:

major

3'SS Sequence:

AGCAGTGGCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TGTGGCTTCACC

Flanking Amino Acid:

AGDTSPVAFPTRCEAQAGHS

Intron Amino Acid Position:

627

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.34

1.2

57.1

36.9

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

49.7

-0

1.1

38.3

43.8

Minor 5ss

14.3

-4.1

3.7

19.3

30.9

Minor BPS

49.2

-0

2.3

66.71

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020902

13156984 - 13186739

29756