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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1320615_1322215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1320615 - 1322215

Intron Length:

1601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAACC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

GAAGGTTGATCT

Flanking Amino Acid:

DLQSPGKESEDGDSEKRDPF

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.9

33.2

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

0.61

0.9

32.5

Minor 5ss

34.1

-1.8

44.4

43.1

Minor BPS

39.8

-0.6

51.42

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017795

1320456 - 1347137

26682

ENSAPLT00000008775

1320456 - 1329797

9342