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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1322279_1324696_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1322279 - 1324696

Intron Length:

2418

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCGACCCCA

5'SS Class:

weak_major

3'SS Sequence:

TCATTTCCAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTGCACAACT

Flanking Amino Acid:

HTKGETRLCWLNGGSTSSSH

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.4

48.3

41.9

Major BPS

100

1.24

0.5

100

Major PPT

70.3

0.46

0.9

66.9

Minor 5ss

27.5

-2.6

3.9

42.6

Minor BPS

49.5

0.05

2.2

77.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017795

1320456 - 1347137

26682

ENSAPLT00000008775

1320456 - 1329797

9342