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Intron Name: Anas_platyrhynchos_platyrhynchos_15_13267961_13268893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13267961 - 13268893

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGAGG

5'SS Class:

major

3'SS Sequence:

TGTTTGGTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TATAAGTTACTA

Flanking Amino Acid:

EKIKEQLGEDVVEKFDYVFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

60.8

45.3

Major BPS

68.1

0.45

58.1

38.5

Major PPT

75.1

0.56

69.5

41.6

Minor 5ss

26.7

-2.7

31.4

42.5

Minor BPS

43.2

-0.5

2.3

58.13

41.5

Associated Gene:

Gene:

PMM2

Ensembl Gene ID:

ENSAPLG00000012003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022532

13260367 - 13269338

8972

ENSAPLT00000012505

13258965 - 13269338

10374