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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1341488_1345550_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1341488 - 1345550

Intron Length:

4063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGCACAGC

5'SS Class:

weak_major

3'SS Sequence:

GTGCCCATCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

CTGTGCCCATCT

Flanking Amino Acid:

SLRLTCTEEMGLGWEHSSPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.1

49.3

41.5

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

47.9

-0.1

1.7

54.9

40.1

Minor 5ss

32.7

-2

3.2

39.9

Minor BPS

40.4

-0.6

2.3

60.54

48.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017795

1320456 - 1347137

26682