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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_13421892_13425629_R

Intron Information:

Intron Rank:
134860
Intron Class:
major
Intron Phase:
Intron Coordinates:
13421892 - 13425629
Intron Length:
3738

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAAGTTCT
5'SS Class:
strong_major
3'SS Sequence:
TGGCATTTTGTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTCTAT
U12 Branch Point Sequence:
TTTTTTCTATTC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.6
0.89
0.9
81.4
33.4
Major BPS
73.8
0.59
1.3
72.8
43
Major PPT
71.5
0.49
0.9
65.7
40.6
Minor 5ss
42.4
-0.8
2.8
51.5
44.9
Minor BPS
51.7
0.03
1.9
70.01
36

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000019892
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044210
13421829 - 13425803
3975