Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_1383588_1384808_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1383588 - 1384808

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

AAAACTCCAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTGTCAAAACT

Flanking Amino Acid:

RVPKSSNETPEAAANGALSQ

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

1.1

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

47.9

-0.1

1.1

43.2

36.6

Minor 5ss

31.7

-2.1

42.5

44.2

Minor BPS

53.6

0.19

80.09

42.1

Associated Gene:

Gene:

ZNF598

Ensembl Gene ID:

ENSAPLG00000008877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019690

1378447 - 1388838

10392

ENSAPLT00000009236

1378447 - 1388880

10434