Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_1384882_1385532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1384882 - 1385532

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACTAT

U12 Branch Point Sequence:

GCTGCTGTAACT

Flanking Amino Acid:

AIGSAVGPLQGSAQLAAVKL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

78.8

38.3

Major BPS

54.3

0.11

1.3

53.1

42.3

Major PPT

83.8

0.76

0.7

79.1

26.6

Minor 5ss

43.4

-0.7

2.8

46.2

Minor BPS

52.1

0.15

2.1

71.8

45.5

Associated Gene:

Gene:

ZNF598

Ensembl Gene ID:

ENSAPLG00000008877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019690

1378447 - 1388838

10392

ENSAPLT00000009236

1378447 - 1388880

10434