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Intron Name: Anas_platyrhynchos_platyrhynchos_15_14242883_14297048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14242883 - 14297048

Intron Length:

54166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTCCATTAATC

Flanking Amino Acid:

APPPPIPAYGGYGRVYAADP

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

90.2

0.9

0.7

85.3

28.7

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

71.9

0.67

1.5

81.43

32.2

Associated Gene:

Gene:

RBFOX1

Ensembl Gene ID:

ENSAPLG00000013263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043774

14241257 - 14527469

286213

ENSAPLT00000038704

14241257 - 14545701

304445

ENSAPLT00000028614

14241257 - 14545701

304445