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Intron Name: Anas_platyrhynchos_platyrhynchos_15_14271045_14279493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14271045 - 14279493

Intron Length:

8449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTTTATGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

CTATAGCAAACC

Flanking Amino Acid:

QDGFYGADIYGGYAAYRYAQ

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

72.5

0.56

1.1

63.4

Major PPT

76.4

0.59

0.9

73.8

41.4

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

38.4

-0.9

2.5

52.65

44.4

Associated Gene:

Gene:

RBFOX1

Ensembl Gene ID:

ENSAPLG00000013263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043836

14241257 - 14520465

279209

ENSAPLT00000019819

14241379 - 14520465

279087

ENSAPLT00000013817

14241257 - 14402282

161026