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Intron Name: Anas_platyrhynchos_platyrhynchos_15_14271045_14297048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14271045 - 14297048

Intron Length:

26004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTATGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

CTATAGCAAACC

Flanking Amino Acid:

APPPPIPAYGGVVMLPTGMP

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

72.5

0.56

1.1

63.4

Major PPT

76.4

0.59

0.9

73.8

41.4

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

38.4

-0.9

2.5

52.65

44.4

Associated Gene:

Gene:

RBFOX1

Ensembl Gene ID:

ENSAPLG00000013263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038078

14241357 - 14402282

160926