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Intron Name: Anas_platyrhynchos_platyrhynchos_15_14313897_14332516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14313897 - 14332516

Intron Length:

18620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

GTTCCAAAACCA

Flanking Amino Acid:

GAVYSPEFYAGRVLLCQANQ

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

62.7

0.32

1.2

33.2

Major PPT

84.4

0.77

0.7

80.6

24.7

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

-0.7

2.2

56.02

42.3

Associated Gene:

Gene:

RBFOX1

Ensembl Gene ID:

ENSAPLG00000013263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038078

14241357 - 14402282

160926

ENSAPLT00000028614

14241257 - 14545701

304445

ENSAPLT00000019819

14241379 - 14520465

279087

ENSAPLT00000043836

14241257 - 14520465

279209

ENSAPLT00000013817

14241257 - 14402282

161026

ENSAPLT00000043774

14241257 - 14527469

286213