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Intron Name: Anas_platyrhynchos_platyrhynchos_15_14346929_14349742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14346929 - 14349742

Intron Length:

2814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TATTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCATGTTAATT

Flanking Amino Acid:

RDPDLRQMFGQFGKILDVEI

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.4

37.4

Major BPS

100

1.24

0.5

100

Major PPT

89.9

0.9

0.7

29.3

Minor 5ss

40.4

-1.1

2.8

53.8

42.8

Minor BPS

55.4

0.25

2.1

75.63

41.8

Associated Gene:

Gene:

RBFOX1

Ensembl Gene ID:

ENSAPLG00000013263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028614

14241257 - 14545701

304445

ENSAPLT00000043836

14241257 - 14520465

279209

ENSAPLT00000019819

14241379 - 14520465

279087

ENSAPLT00000043774

14241257 - 14527469

286213

ENSAPLT00000013817

14241257 - 14402282

161026

ENSAPLT00000038704

14241257 - 14545701

304445

ENSAPLT00000038078

14241357 - 14402282

160926