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Intron Name: Anas_platyrhynchos_platyrhynchos_15_14398166_14545557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14398166 - 14545557

Intron Length:

147392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGATCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTGATCTTCACA

Flanking Amino Acid:

CALTFMYLQQGNQEATAPPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

0.85

0.9

39.9

Major PPT

78.1

0.63

0.9

72.4

37.7

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

59.4

0.29

1.8

71.36

Associated Gene:

Gene:

RBFOX1

Ensembl Gene ID:

ENSAPLG00000013263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038704

14241257 - 14545701

304445

ENSAPLT00000028614

14241257 - 14545701

304445