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Intron Name: Anas_platyrhynchos_platyrhynchos_15_14520592_14523209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

14520592 - 14523209

Intron Length:

2618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATTAA

U12 Branch Point Sequence:

TTTTTTTTACAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

24.5

Major BPS

54.2

0.1

1.1

36.7

Major PPT

95.1

1.02

0.5

90.9

21.1

Minor 5ss

39.4

-1.2

2.8

51.5

Minor BPS

57.9

0.11

1.8

67.62

40.4

Associated Gene:

Gene:

RBFOX1

Ensembl Gene ID:

ENSAPLG00000013263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043774

14241257 - 14527469

286213