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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1457366_1457923_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1457366 - 1457923

Intron Length:
558

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTTGT

5'SS Class:
major

3'SS Sequence:
CCTCCTTCCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATAAAT

U12 Branch Point Sequence:
ATGTGTATAAAT

Flanking Amino Acid:
NIARLRKDQKEAVLAFLVTW

Intron Amino Acid Position:
720

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.2
72.6
39.2

Major BPS
74.5
0.61
1
79.6
29.1

Major PPT
72.3
0.5
0.7
65
30.6

Minor 5ss
44.4
-0.6
2.5
59.5
44.9

Minor BPS
47.3
-0.1
2.1
68.35
42.5

Associated Gene:

Gene:
TBL3

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1456621 - 1467691
11071