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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1463633_1463937_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1463633 - 1463937

Intron Length:
305

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
GTGTTTGTGTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTAAA

U12 Branch Point Sequence:
TGACAGATAATT

Flanking Amino Acid:
GLHFLTAGSKGVLKIWEVAT

Intron Amino Acid Position:
268

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.1
1.04
0.7
90.4
20.6

Major BPS
67.6
0.44
1.2
69.9
35.3

Major PPT
65.7
0.35
1.1
65.8
45.3

Minor 5ss
33.2
-1.9
3.4
48.7
47.5

Minor BPS
42
-0.5
2.3
61.52
41.7

Associated Gene:

Gene:
TBL3

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1456621 - 1467691
11071