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Intron Name: Anas_platyrhynchos_platyrhynchos_15_1465214_1465719_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1465214 - 1465719

Intron Length:
506

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGATCC

5'SS Class:
strong_major

3'SS Sequence:
ACCCTTCTCCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
CTGTCTTTCATT

Flanking Amino Acid:
FDSTSTLLASGGCDSTIKIW

Intron Amino Acid Position:
125

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.9
0.96
0.8
78.6
29.6

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
62
0.27
1
59.5
35.3

Minor 5ss
39.2
-1.2
3
51.6
45.1

Minor BPS
60.1
0.4
1.8
74.76
43.2

Associated Gene:

Gene:
TBL3

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1456621 - 1467691
11071